Description : recombinase *(RecA) & original description: none
Gene families : OG0001867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g09664 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g57893 | No alias | recombinase *(RecA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g20566 | No alias | recombinase *(RecA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0015.g013853 | No alias | recombinase *(RecA) & original description: CDS=96-1391 | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020482001 | No alias | Cell cycle.organelle machineries.DNA replication.genome... | 0.04 | OrthoFinder output from all 47 species | |
Len_g30605 | No alias | recombinase *(RecA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp3g08320.1 | No alias | recombinase (RecA) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g54007 | No alias | recombinase *(RecA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005041_P001 | Zm00001e005041 | recombinase (RecA) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013765 | DNA_recomb/repair_RecA | 74 | 335 |
No external refs found! |