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  5. Tin_g09456

Tin_g09456 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09456

Target Alias Description ECC score Gene Family Method Actions
Adi_g060210 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g08293 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g33880 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g39859 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g03269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31290 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g37348 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 370 395
IPR000571 Znf_CCCH 239 263
IPR000571 Znf_CCCH 167 192
IPR000571 Znf_CCCH 326 350
IPR000571 Znf_CCCH 114 138
No external refs found!