Tin_g08710

Description : not classified & original description: none

Gene families : OG0002898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002898_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g08710

Target	Alias	Description	ECC score	Gene Family Method
Aev_g19441	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g08127	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g22073	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g31837	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g29055	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G081400.1	Ceric.13G081400	not classified & original description: pacid=50635650...	0.03	OrthoFinder output from all 47 species
Dac_g21055	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g04885	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g11086	No alias	GeBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05206	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo407447	COPT5	Nutrient uptake.copper uptake.reduction-based...	0.02	OrthoFinder output from all 47 species
Spa_g51019	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54337	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	HCCA
MF	GO:0004057	arginyltransferase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0016598	protein arginylation	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016755	aminoacyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007592	GEBP	281	375

External Links

No external refs found!

Tin_g08710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation