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  5. Tin_g05219

Tin_g05219 (SEC3A)


Aliases : SEC3A

Description : component *(SEC3) of Exocyst complex & original description: none


Gene families : OG0003449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05219

Target Alias Description ECC score Gene Family Method Actions
Adi_g024959 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09800 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25790.t1 SEC3A, Aspi01Gene25790 component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07726 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g42750.1 SEC3A, LOC_Os03g42750 component SEC3 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Lfl_g03342 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g07200.1 SEC3A component SEC3 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Ore_g06314 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo440749 SEC3A Vesicle trafficking.target membrane tethering.Exocyst... 0.04 OrthoFinder output from all 47 species
Solyc12g088990.2.1 SEC3A, Solyc12g088990 component SEC3 of Exocyst complex 0.04 OrthoFinder output from all 47 species
Zm00001e005089_P001 SEC3A, Zm00001e005089 component SEC3 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Zm00001e021356_P002 SEC3A, Zm00001e021356 component SEC3 of Exocyst complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019160 Sec3_C 220 479
IPR019160 Sec3_C 495 862
IPR028258 Sec3-PIP2_bind 47 143
No external refs found!