Tin_g04992 (VPS26B)

Aliases : VPS26B

Description : component *(VPS26) of Retromer protein recycling complex & original description: none

Gene families : OG0003204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003204_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g04992

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g414200	VPS26B	Vesicle trafficking.endomembrane trafficking.protein...	0.01	OrthoFinder output from all 47 species
Smo109782	VPS26B	Vesicle trafficking.endomembrane trafficking.protein...	0.04	OrthoFinder output from all 47 species
Solyc04g050240.3.1	VPS26B, Solyc04g050240	component VPS26 of Retromer protein recycling complex	0.02	OrthoFinder output from all 47 species
Zm00001e011074_P002	VPS26B, Zm00001e011074	component VPS26 of Retromer protein recycling complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028934	Vps26-related	9	282

External Links

No external refs found!