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  5. Tin_g04358

Tin_g04358 (RD2)


Aliases : RD2

Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04358
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00027540 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g03419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08167 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24168 RD2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000062 No alias not classified & original description: CDS=1-519 0.03 OrthoFinder output from all 47 species
Sam_g14074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 33 167
No external refs found!