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  5. Tin_g04177

Tin_g04177


Description : not classified & original description: none


Gene families : OG0002305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G15900 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.02 OrthoFinder output from all 47 species
Adi_g116683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24948.t1 Aspi01Gene24948 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G036500.1 Ceric.02G036500 not classified & original description: pacid=50584460... 0.04 OrthoFinder output from all 47 species
Ceric.23G021800.1 Ceric.23G021800 not classified & original description: pacid=50609748... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021721.21 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g14767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017080001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031845001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_15275 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g50660.1 LOC_Os05g50660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g06040.1 LOC_Os11g06040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo413327 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g108920.4.1 Solyc01g108920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019627 urea metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0035550 urease complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043419 urea catabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 596 673
IPR013937 Sorting_nexin_C 870 1009
IPR003114 Phox_assoc 106 281
No external refs found!