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Tin_g03421


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0004076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03421
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G44740 No alias Class II aaRS and biotin synthetases superfamily protein 0.03 OrthoFinder output from all 47 species
LOC_Os04g32650.1 LOC_Os04g32650 glycine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Sam_g29656 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 580 667
IPR000738 WHEP-TRS_dom 22 63
IPR002314 aa-tRNA-synt_IIb 255 336
No external refs found!