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  5. Tin_g01519

Tin_g01519 (NDH-M)


Aliases : NDH-M

Description : component *(NdhM) of NDH subcomplex A & original description: none


Gene families : OG0008534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01519
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT4G37925 NDH-M subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex 0.05 OrthoFinder output from all 47 species
Aev_g12337 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Ala_g08918 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Aob_g02682 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Aop_g00976 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene21338.t1 NDH-M, Aspi01Gene21338 component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010867 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G022700.1 NDH-M, Ceric.24G022700 component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Dac_g01225 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Dcu_g10850 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Dde_g47672 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Ehy_g11734 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01008801001 NDH-M Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
Gb_31901 NDH-M component NdhM of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
LOC_Os04g45600.1 NDH-M, LOC_Os04g45600 component NdhM of NDH subcomplex A 0.07 OrthoFinder output from all 47 species
Len_g06317 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Lfl_g04438 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Mp8g09060.1 NDH-M component NdhM of NDH subcomplex A 0.02 OrthoFinder output from all 47 species
Msp_g46696 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Nbi_g14325 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.15 OrthoFinder output from all 47 species
Ore_g14021 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Pir_g58341 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016335 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Sam_g17340 No alias component *(NdhM) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Sam_g17341 No alias component *(NdhM) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Solyc04g057980.3.1 NDH-M, Solyc04g057980 component NdhM of NDH subcomplex A 0.05 OrthoFinder output from all 47 species
Spa_g49805 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Zm00001e007397_P001 NDH-M, Zm00001e007397 component NdhM of NDH subcomplex A 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018922 NdhM 63 171
No external refs found!