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  5. Tin_g00477

Tin_g00477 (DRB1, HYL1)


Aliases : DRB1, HYL1

Description : not classified & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00477

Target Alias Description ECC score Gene Family Method Actions
AT1G09700 DRB1, HYL1 dsRNA-binding domain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g014057 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16416 DRB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05097 DRB1, HYL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009738 DRB5 not classified & original description: CDS=134-793 0.03 OrthoFinder output from all 47 species
Cba_g26876 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13568 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ehy_g28214 DRB1, HYL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g01916.1 DRB1, HYL1,... component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.02 OrthoFinder output from all 47 species
Len_g23544 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19000 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g03363 DRB1, HYL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26815 DRB3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006925 DRB1, HYL1 not classified & original description: CDS=11-886 0.03 OrthoFinder output from all 47 species
Smo71415 DRB1, HYL1 Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 89 150
IPR014720 dsRBD_dom 3 67
No external refs found!