Aliases : SOC1, AGL20, ATSOC1
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G37940 | AGL21 | AGAMOUS-like 21 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g010317 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g18223 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g37796 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11193 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g28471 | SHP2, AGL5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g12233 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g07320 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g10747 | AGL8, FUL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g50123 | AGL3, SEP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009171001 | SVP, AGL22 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g01355.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Len_g04127 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g20331 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g33207 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_1767g0010 | AGL66 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g11525 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g19814 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02675 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0239.g026596 | No alias | not classified & original description: CDS=1-651 | 0.04 | OrthoFinder output from all 47 species | |
Smo437868 | AGL29 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g20318 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g25479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005705_P004 | AGL7, AP1, Zm00001e005705 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006465 | signal peptide processing | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
No external refs found! |