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  5. Pir_g57957

Pir_g57957 (PTAC12, HMR)


Aliases : PTAC12, HMR

Description : transcriptional coactivator *(HEMERA) & original description: none


Gene families : OG0007916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57957

Target Alias Description ECC score Gene Family Method Actions
Adi_g057282 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Aev_g02450 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Aob_g13152 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Aop_g30493 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03257 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G090100.1 PTAC12, HMR,... transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56350.3 PTAC12, HMR,... PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 OrthoFinder output from all 47 species
Tin_g27291 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!