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  5. Pir_g56892

Pir_g56892 (NDHB.1)


Aliases : NDHB.1

Description : component *(NdhB) of NDH membrane subcomplex M & original description: none


Gene families : OG0002858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g56892

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272610 evm_27.TU.AmTr_v1... NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00543p00012290 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.04 OrthoFinder output from all 47 species
AT2G07689 No alias NADH-Ubiquinone/plastoquinone (complex I) protein 0.02 OrthoFinder output from all 47 species
ATCG00890 NDHB.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0.15 OrthoFinder output from all 47 species
ATCG01250 NDHB.2 NADH-Ubiquinone/plastoquinone (complex I) protein 0.15 OrthoFinder output from all 47 species
ATMG01320 NAD2B, NAD2.2, NAD2 NADH dehydrogenase 2B 0.04 OrthoFinder output from all 47 species
Aev_g13772 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.18 OrthoFinder output from all 47 species
Ala_g08110 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.06 OrthoFinder output from all 47 species
Als_g09956 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.06 OrthoFinder output from all 47 species
Als_g16648 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Aob_g05863 NDHB.1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g16276 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.06 OrthoFinder output from all 47 species
Ceric.01G057300.1 NDHB.1, Ceric.01G057300 component *(NdhB) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Ceric.02G011800.1 NDHB.1, Ceric.02G011800 not classified & original description: pacid=50586072... 0.02 OrthoFinder output from all 47 species
Ceric.05G040600.1 NDHB.1, Ceric.05G040600 not classified & original description: pacid=50579146... 0.07 OrthoFinder output from all 47 species
Ceric.26G042200.1 NDHB.1, Ceric.26G042200 component *(NdhB) of NDH membrane subcomplex M &... 0.09 OrthoFinder output from all 47 species
Ceric.28G022400.1 NDHB.1, Ceric.28G022400 not classified & original description: pacid=50570102... 0.03 OrthoFinder output from all 47 species
Ceric.29G005900.1 NDHB.1, Ceric.29G005900 not classified & original description: pacid=50624802... 0.1 OrthoFinder output from all 47 species
Ceric.29G006000.1 NDHB.1, Ceric.29G006000 not classified & original description: pacid=50625919... 0.1 OrthoFinder output from all 47 species
Dcu_g42753 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.05 OrthoFinder output from all 47 species
GSVIVT01007203001 NAD2B, NAD2.2, NAD2 NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris 0.03 OrthoFinder output from all 47 species
Gb_02794 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11367 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 OrthoFinder output from all 47 species
Gb_12705 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_17281 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.06 OrthoFinder output from all 47 species
Gb_18608 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.04 OrthoFinder output from all 47 species
Gb_26088 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26291 NDHB.1 component NdhB of NDH membrane subcomplex M 0.04 OrthoFinder output from all 47 species
Gb_35878 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g16854.1 NDHB.1, LOC_Os04g16854 component NdhB of NDH membrane subcomplex M 0.02 OrthoFinder output from all 47 species
LOC_Os07g25004.1 NDHB.1, LOC_Os07g25004 component NdhB of NDH membrane subcomplex M 0.17 OrthoFinder output from all 47 species
LOC_Os08g15248.1 NDHB.1, LOC_Os08g15248 component NdhB of NDH membrane subcomplex M 0.17 OrthoFinder output from all 47 species
Lfl_g33043 NDHB.1 not classified & original description: none 0.16 OrthoFinder output from all 47 species
Lfl_g33049 NDHB.1 not classified & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g25321 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.02 OrthoFinder output from all 47 species
Nbi_g25819 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.08 OrthoFinder output from all 47 species
Ore_g01088 NDHB.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15901 No alias component *(ND2/NQO14) of NADH dehydrogenase proton... 0.06 OrthoFinder output from all 47 species
Smo137726 NDHB.1 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
Smo138433 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha 0.03 OrthoFinder output from all 47 species
Solyc00g125990.1.1 Solyc00g125990 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc00g500146.1.1 NDHB.1, Solyc00g500146 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.11 OrthoFinder output from all 47 species
Solyc01g017170.1.1 NDHB.1, Solyc01g017170 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.03 OrthoFinder output from all 47 species
Solyc01g017260.1.1 NDHB.1, Solyc01g017260 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc03g122010.1.1 NDHB.1, Solyc03g122010 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.13 OrthoFinder output from all 47 species
Solyc09g015260.1.1 NDHB.1, Solyc09g015260 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.02 OrthoFinder output from all 47 species
Solyc09g050069.1.1 NDHB.1, Solyc09g050069 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.13 OrthoFinder output from all 47 species
Solyc09g050070.1.1 NDHB.1, Solyc09g050070 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.12 OrthoFinder output from all 47 species
Solyc10g061887.1.1 NDHB.1, Solyc10g061887 component NdhB of NDH membrane subcomplex M 0.14 OrthoFinder output from all 47 species
Solyc11g021090.3.1 NDHB.1, Solyc11g021090 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.12 OrthoFinder output from all 47 species
Solyc12g033020.1.1 NDHB.1, Solyc12g033020 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 79 374
No external refs found!