Aliases : emb2394
Description : component *(uL6c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0003589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003589_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g55752 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dac_g02024 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g12981 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g24020.1 | emb2394, LOC_Os03g24020 | component psRPL6 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Len_g08412 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g00829 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g03630.1 | emb2394 | component psRPL6 of large ribosomal subunit proteome | 0.01 | OrthoFinder output from all 47 species | |
Ore_g05671 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g34962 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g31709 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11042 | emb2394 | component *(uL6c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e001699_P002 | emb2394, Zm00001e001699 | component psRPL6 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038182_P002 | emb2394, Zm00001e038182 | component psRPL6 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No external refs found! |