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Aliases : TIR5, MSG1, NPH4, IAA23, IAA25, IAA21, BIP, ARF7
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00036p00215270 | ARF21,... | Auxin response factor 7 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G35240 | ARF20 | auxin response factor 20 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G35520 | ARF15 | auxin response factor 15 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60450 | ARF4 | auxin response factor 4 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g024483 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059116 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075709 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06750 | ARF16 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g27966 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11014 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32218 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0433.g069577 | ARF6 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g11427 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g78264 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G034300.1 | ARF16, Ceric.18G034300 | ARF-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G056500.1 | ARF16, Ceric.32G056500 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22423 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03681 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08691 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09257 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g22354 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035205001 | ARF8, ATARF8 | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_32864 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g10088 | ARF10 | ARF-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g13614 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26452 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g33451 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g42774 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04517 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007919 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: CDS=1-3501 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010740 | TIR5, MSG1,... | ARF-type transcription factor & original description: CDS=1-2400 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016361 | ARF16 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29160 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004554_P002 | ARF16, Zm00001e004554 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
| MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | HCCA |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 500 | 588 |
| No external refs found! |