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  5. Pir_g41188

Pir_g41188


Description : A1-class (Pepsin) protease & original description: none


Gene families : OG0002524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41188

Target Alias Description ECC score Gene Family Method Actions
Als_g12337 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0210.g058084 No alias A1-class (Pepsin) protease & original description: CDS=1-1563 0.05 OrthoFinder output from all 47 species
GSVIVT01006895001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 OrthoFinder output from all 47 species
Solyc04g072690.3.1 Solyc04g072690 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Zm00001e023878_P004 Zm00001e023878 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Zm00001e029902_P001 Zm00001e029902 pepsin-type protease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 327 448
IPR032861 TAXi_N 106 288
No external refs found!