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  5. Pir_g40772

Pir_g40772


Description : not classified & original description: none


Gene families : OG0002172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40772
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00211870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Dcu_g00575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021471001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_30699 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55270.1 LOC_Os01g55270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g17050.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g016670.3.1 Solyc08g016670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g11993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR007052 CS_dom 65 140
No external refs found!