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  5. Pir_g36640

Pir_g36640 (PUR ALPHA-1)


Aliases : PUR ALPHA-1

Description : not classified & original description: none


Gene families : OG0005204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g36640
Cluster HCCA: Cluster_225


Type GO Term Name Evidence Source
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA Interproscan
MF GO:0032422 purine-rich negative regulatory element binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006628 PUR-bd_fam 9 134
No external refs found!