Pir_g30949 (WRKY39, ATWRKY39)

Aliases : WRKY39, ATWRKY39

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g30949
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.03	OrthoFinder output from all 47 species
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
Ceric.10G040600.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01029265001	ATWRKY11, WRKY11	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01033188001	ATWRKY11, WRKY11	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os01g54600.1	ATWRKY69,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g47060.1	MEE24, AtWRKY35,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os04g50920.1	MEE24, AtWRKY35,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os08g13840.2	ATWRKY11,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_88419g0010	WRKY21	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp3g00010.1	ATWRKY11, WRKY11	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Pir_g23569	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28110	ATWRKY69, WRKY69	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008581	ATWRKY69, WRKY69	WRKY-type transcription factor & original description: CDS=1-1491	0.03	OrthoFinder output from all 47 species
Smo77979	MEE24, AtWRKY35, WRKY35	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Solyc04g078550.3.1	ATWRKY7, WRKY7,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc10g011910.4.1	WRKY22,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Tin_g00602	WRKY21	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005078_P002	WRKY74,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e023305_P002	WRKY14, AR411,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004564	beta-fructofuranosidase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006751	glutathione catabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
MF	GO:0009976	tocopherol cyclase activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0043171	peptide catabolic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	174	204
IPR003657	WRKY_dom	211	250

External Links

No external refs found!

Pir_g30949 (WRKY39, ATWRKY39)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation