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  5. Pir_g30129

Pir_g30129


Description : not classified & original description: none


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g30129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Als_g63256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_19820 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08250.1 LOC_Os06g08250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g37230.1 LOC_Os11g37230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10274793g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426524g0010 No alias Probable E3 ubiquitin-protein ligase RHY1A... 0.04 OrthoFinder output from all 47 species
Msp_g27907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g007170.3.1 Solyc07g007170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g02703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009715_P001 Zm00001e009715 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 240 282
No external refs found!