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  5. Pir_g22850

Pir_g22850


Description : promotor-binding component *(TFC3) of TFIIIc transcription factor complex & original description: none


Gene families : OG0002733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002733_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22850
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Lfl_g18937 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Ore_g35774 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Spa_g06971 No alias promotor-binding component *(TFC3) of TFIIIc... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR046488 Sfc3/Tfc3_C 638 755
No external refs found!