Pir_g19843


Description : not classified & original description: none


Gene families : OG0005276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005276_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19843

Target Alias Description ECC score Gene Family Method Actions
AT2G44870 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Adi_g111387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os10g41940.1 LOC_Os10g41940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g03320.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g25484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001047 No alias not classified & original description: CDS=58-897 0.03 OrthoFinder output from all 47 species
Sam_g09480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005550.4.1 Solyc07g005550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!