1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g19829

Pir_g19829 (LUT2)


Aliases : LUT2

Description : lycopene epsilon cyclase *(LCY-e) & original description: none


Gene families : OG0006884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006884_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19829
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Als_g15689 LUT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09021 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14206.t1 LUT2, Aspi01Gene14206 lycopene epsilon cyclase *(LCY-e) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008524 LUT2 lycopene epsilon cyclase *(LCY-e) & original... 0.04 OrthoFinder output from all 47 species
Cba_g01169 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G087300.1 LUT2, Ceric.11G087300 lycopene epsilon cyclase *(LCY-e) & original... 0.05 OrthoFinder output from all 47 species
Cre06.g267600 LUT2 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Dac_g24635 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g17548 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015169001 LUT2 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
LOC_Os01g39960.1 LUT2, LOC_Os01g39960 lycopene epsilon cyclase (LCY-e) 0.05 OrthoFinder output from all 47 species
Len_g01326 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09120 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.08 OrthoFinder output from all 47 species
MA_10437269g0010 LUT2 lycopene epsilon cyclase (LCY-e) 0.09 OrthoFinder output from all 47 species
Mp7g05820.1 LUT2 lycopene epsilon cyclase (LCY-e) 0.01 OrthoFinder output from all 47 species
Nbi_g08673 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03904 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g18174 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g06391 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13457 No alias lycopene epsilon cyclase *(LCY-e) & original description: none 0.02 OrthoFinder output from all 47 species
Smo101391 LUT2 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Solyc12g008980.3.1 LUT2, Solyc12g008980 lycopene epsilon cyclase (LCY-e) 0.09 OrthoFinder output from all 47 species
Tin_g22549 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e027776_P002 LUT2, Zm00001e027776 lycopene epsilon cyclase (LCY-e) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!