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  5. Pir_g19348

Pir_g19348 (CRR6)


Aliases : CRR6

Description : assembly factor CRR6 involved in NDH complex assembly & original description: none


Gene families : OG0005729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005729_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19348
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00251190 CRR6,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
Aev_g00859 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Aop_g09384 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Ceric.08G039900.1 CRR6, Ceric.08G039900 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Dde_g19322 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.05 OrthoFinder output from all 47 species
GSVIVT01012872001 CRR6 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
Gb_20870 CRR6 assembly factor CRR6 involved in NDH complex assembly 0.04 OrthoFinder output from all 47 species
LOC_Os08g07060.1 CRR6, LOC_Os08g07060 assembly factor CRR6 involved in NDH complex assembly 0.03 OrthoFinder output from all 47 species
Len_g27896 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Ore_g09640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16763 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.02 OrthoFinder output from all 47 species
Ppi_g14751 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020856 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Solyc07g007280.4.1 CRR6, Solyc07g007280 assembly factor CRR6 involved in NDH complex assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014946 CRR6 92 250
No external refs found!