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  5. Pir_g18320

Pir_g18320 (WAVE4, ITB1, SCAR2,...)


Aliases : WAVE4, ITB1, SCAR2, ATSCAR2, DIS3

Description : component *(SCAR) of SCAR/WAVE ARP2/3-activating complex & original description: none


Gene families : OG0001552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18320

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0027.g023467 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Ceric.12G082000.1 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Ceric.17G028700.1 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11040.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 OrthoFinder output from all 47 species
Mp5g21730.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!