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  5. Pir_g16159

Pir_g16159 (TIC40, ATTIC40, PDE120)


Aliases : TIC40, ATTIC40, PDE120

Description : component *(Tic40) of inner envelope TIC translocation system & original description: none


Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16159

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0109.g045418 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ceric.35G014600.1 TIC40, ATTIC40,... component *(Tic40) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Cre12.g508000 TIC40, ATTIC40, PDE120 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Ore_g25748 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ppi_g02041 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Solyc11g020300.2.1 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Zm00001e008048_P001 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.02 OrthoFinder output from all 47 species
Zm00001e040911_P002 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 387 438
No external refs found!