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Description : not classified & original description: none
Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g15705 | |
| Cluster | HCCA: Cluster_268 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g100466 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g49241 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02891 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g13816 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0012.g012981 | No alias | not classified & original description: CDS=77-1648 | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g04658 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019400001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019725001 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Gb_31866 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16356 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_66888g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03019 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06254 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10687 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g28738 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000048 | No alias | not classified & original description: CDS=1-1572 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018460 | No alias | not classified & original description: CDS=190-1635 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g075560.2.1 | Solyc06g075560 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g052640.3.1 | Solyc07g052640 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065390.3.1 | Solyc11g065390 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g065400.2.1 | Solyc11g065400 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g056200.2.1 | Solyc12g056200 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002205_P001 | Zm00001e002205 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015444_P001 | Zm00001e015444 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000347 | THO complex | IEP | HCCA |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015923 | mannosidase activity | IEP | HCCA |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006740 | DUF604 | 240 | 496 |
| No external refs found! |