Pir_g15404 (EMB2369)

Aliases : EMB2369

Description : leucine-tRNA ligase & original description: none

Gene families : OG0005525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g15404
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00043170	EMB2369,...	Leucine--tRNA ligase, chloroplastic/mitochondrial...	0.02	OrthoFinder output from all 47 species
AMTR_s00106p00046740	EMB2369,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Ala_g11026	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g17065	EMB2369	leucine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g03591	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12623	EMB2369	leucine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0008.g011345	EMB2369	leucine-tRNA ligase & original description: CDS=1-2106	0.03	OrthoFinder output from all 47 species
Cre13.g578451	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder output from all 47 species
Dac_g01026	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03124	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01662	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012668001	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
LOC_Os01g03020.1	EMB2369, LOC_Os01g03020	leucine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Len_g36010	EMB2369	leucine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g03404	EMB2369	leucine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
MA_509140g0010	EMB2369	Leucine--tRNA ligase, chloroplastic/mitochondrial...	0.03	OrthoFinder output from all 47 species
Mp3g22600.1	EMB2369	leucine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Nbi_g15838	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g48734	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16597	No alias	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025691_P001	EMB2369, Zm00001e025691	leucine-tRNA ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
MF	GO:0098809	nitrite reductase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	832	947
IPR002300	aa-tRNA-synth_Ia	745	781
IPR025709	Leu_tRNA-synth_edit	323	495
IPR015413	Methionyl/Leucyl_tRNA_Synth	142	274

External Links

No external refs found!

Pir_g15404 (EMB2369)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation