Pir_g13301


Description : not classified & original description: none


Gene families : OG0007552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007552_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13301
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT5G57345 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.04 OrthoFinder output from all 47 species
Adi_g001525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G067900.1 Ceric.30G067900 not classified & original description: pacid=50608480... 0.04 OrthoFinder output from all 47 species
Dac_g04917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00339 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_9214342g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!