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  5. Pir_g12850

Pir_g12850 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12850

Target Alias Description ECC score Gene Family Method Actions
Adi_g084468 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108099 RBL2, ATRBL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07982 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33530 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39472 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05092 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G071700.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50635382... 0.03 OrthoFinder output from all 47 species
Dde_g17380 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25784 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48130.1 ATRBL6, RBL6,... protease (RBL) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24417 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09832 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.03 OrthoFinder output from all 47 species
Sam_g13475 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13820 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 112 254
No external refs found!