1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g10236

Pir_g10236 (ATAB2)


Aliases : ATAB2

Description : not classified & original description: none


Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00115980 ATAB2,... Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g004820 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014503 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09787 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22462 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04128 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04239 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02871 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31544 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene56263.t1 ATAB2, Aspi01Gene56263 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031031 ATAB2 not classified & original description: CDS=196-1422 0.03 OrthoFinder output from all 47 species
Cba_g03154 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G068300.1 ATAB2, Ceric.21G068300 not classified & original description: pacid=50604093... 0.05 OrthoFinder output from all 47 species
Cre17.g702500 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g11792 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18139 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14997 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04344 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16983 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05805 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032129001 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_34984 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39740.1 ATAB2, LOC_Os02g39740 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g43889 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30744 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g14850.1 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g09962 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00688 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01898 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g05869 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03703 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32398 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015277 ATAB2 not classified & original description: CDS=173-1390 0.04 OrthoFinder output from all 47 species
Sam_g10050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10068 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015079_P001 ATAB2, Zm00001e015079 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046760 Tab2-like_N 123 176
IPR046761 Tab2-like_C 182 396
No external refs found!