Pir_g02916


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02916

Target Alias Description ECC score Gene Family Method Actions
Adi_g003810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005632 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067278 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087501 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11318.t1 CRR22, Aspi01Gene11318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24271.t1 Aspi01Gene24271 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27322.t1 Aspi01Gene27322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56965.t1 Aspi01Gene56965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.03 OrthoFinder output from all 47 species
Cba_g06583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46044 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Dac_g04615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42858 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06364 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38672 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22350 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36350.1 MEF21, LOC_Os05g36350 RNA editing factor (MEF21) 0.03 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Len_g03770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18490 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06165 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06643 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g09949 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33317 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37667 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39111 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11199 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34228 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01285 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11574 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57464 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001920 OTP86 not classified & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002062 No alias not classified & original description: CDS=1-1716 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013199 No alias not classified & original description: CDS=1-744 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019001 No alias not classified & original description: CDS=1-2865 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.03 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17150 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.03 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 38 61
IPR002885 Pentatricopeptide_repeat 138 158
IPR002885 Pentatricopeptide_repeat 64 111
No external refs found!