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  5. Pir_g02582

Pir_g02582 (VALRS, TWN2)


Aliases : VALRS, TWN2

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02582

Target Alias Description ECC score Gene Family Method Actions
Ala_g11536 VALRS, TWN2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Als_g14687 VALRS, TWN2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Msp_g01242 VALRS, TWN2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g27259 VALRS, TWN2 valine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10604 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g12844 VALRS, TWN2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 101 724
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 769 921
No external refs found!