Pir_g01239


Description : subunit epsilon of coat protein complex & original description: none


Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01239

Target Alias Description ECC score Gene Family Method Actions
AT1G30630 No alias Coatomer epsilon subunit 0.08 OrthoFinder output from all 47 species
Adi_g014852 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g00661 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g26735 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Als_g22070 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g19947 No alias subunit epsilon of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007572 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G089800.1 Ceric.10G089800 subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.62 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g00711 No alias subunit epsilon of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01021747001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_19817 No alias subunit epsilon of coat protein complex 0.06 OrthoFinder output from all 47 species
LOC_Os04g52270.1 LOC_Os04g52270 subunit epsilon of coat protein complex 0.03 OrthoFinder output from all 47 species
Mp1g28220.1 No alias subunit epsilon of coat protein complex 0.02 OrthoFinder output from all 47 species
Ppi_g00633 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g28871 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Solyc02g030243.1.1 Solyc02g030243 subunit epsilon of coat protein complex 0.02 OrthoFinder output from all 47 species
Solyc02g069585.1.1 Solyc02g069585 subunit epsilon of coat protein complex 0.06 OrthoFinder output from all 47 species
Spa_g11511 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g18592 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Tin_g00461 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e041631_P001 Zm00001e041631 subunit epsilon of coat protein complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!