Len_g41130

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none

Gene families : OG0003806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003806_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g41130

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01566	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Ala_g16638	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aob_g02381	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Dcu_g23538	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01010735001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Mp6g20330.1	No alias	isoleucine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Nbi_g38211	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Smo153639	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Zm00001e037466_P001	Zm00001e037466	isoleucine-tRNA ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	22	666
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	724	873

External Links

No external refs found!

Len_g41130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation