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  5. Len_g38572

Len_g38572 (NDH48, NDF1)


Aliases : NDH48, NDF1

Description : component *(PnsB1/NDF1) of NDH subcomplex B & original description: none


Gene families : OG0008894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38572

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00210500 NDH48, NDF1,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 OrthoFinder output from all 47 species
AT1G15980 NDH48, NDF1 NDH-dependent cyclic electron flow 1 0.11 OrthoFinder output from all 47 species
Aev_g12496 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Ala_g03899 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Als_g02461 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Aop_g10352 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.13 OrthoFinder output from all 47 species
Aspi01Gene25365.t1 NDH48, NDF1,... component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g011018 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Ceric.33G018200.1 NDH48, NDF1,... component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Dac_g09317 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Dcu_g02770 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Dde_g25386 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20514 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01015957001 NDH48, NDF1 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.09 OrthoFinder output from all 47 species
Lfl_g14548 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Mp4g06360.1 NDH48, NDF1 component PnsB1/NDF1 of NDH subcomplex B 0.04 OrthoFinder output from all 47 species
Msp_g09564 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.08 OrthoFinder output from all 47 species
Nbi_g13870 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.12 OrthoFinder output from all 47 species
Ore_g37695 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Pir_g04871 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.08 OrthoFinder output from all 47 species
Ppi_g11927 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003967 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Sam_g27449 No alias component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Solyc03g116870.3.1 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.12 OrthoFinder output from all 47 species
Spa_g09259 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Tin_g12524 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Zm00001e022142_P001 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.06 OrthoFinder output from all 47 species
Zm00001e039879_P005 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!