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  5. Len_g35838

Len_g35838


Description : not classified & original description: none


Gene families : OG0002106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g35838
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g060975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25373.t1 Aspi01Gene25373 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044906 No alias not classified & original description: CDS=371-3493 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046440 No alias not classified & original description: CDS=678-3113 0.03 OrthoFinder output from all 47 species
Dcu_g12478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g13660.1 LOC_Os12g13660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g05003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g22270.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g13646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01499 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025414 No alias not classified & original description: CDS=1-3054 0.03 OrthoFinder output from all 47 species
Spa_g46901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!