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  5. Len_g33871

Len_g33871


Description : not classified & original description: none


Gene families : OG0000442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000442_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33871

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0037.g025984 No alias not classified & original description: CDS=1-408 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030727 No alias not classified & original description: CDS=657-1109 0.03 OrthoFinder output from all 47 species
Lfl_g11448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g069120.3.1 Solyc06g069120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e027680_P002 Zm00001e027680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!