Smo230146 No alias Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species Smo230656 No alias Cationic peroxidase SPC4 OS=Sorghum bicolor 0.03 OrthoFinder output from all 47 species Smo231472 No alias Peroxidase 55 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species Smo231875 No alias Peroxidase 41 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species Smo232359 No alias Peroxidase 4 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species Smo232728 No alias Peroxidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species Smo266691 No alias Peroxidase 5 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species Smo403769 No alias Peroxidase 65 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species Smo414521 No alias Peroxidase 4 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species Smo91394 No alias Peroxidase 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species Solyc01g006310.3.1 Solyc01g006310 Peroxidase N OS=Armoracia rusticana... 0.02 OrthoFinder output from all 47 species Solyc02g062510.3.1 Solyc02g062510 lignin peroxidase 0.04 OrthoFinder output from all 47 species Solyc02g082090.3.1 Solyc02g082090 Peroxidase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc02g083480.3.1 Solyc02g083480 Peroxidase 64 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc02g083490.3.1 Solyc02g083490 Peroxidase 64 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc02g084780.4.1 Solyc02g084780 lignin peroxidase 0.03 OrthoFinder output from all 47 species Solyc02g084790.3.1 Solyc02g084790 lignin peroxidase 0.03 OrthoFinder output from all 47 species Solyc02g094180.3.1 Solyc02g094180 Peroxidase 51 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc03g025380.3.1 Solyc03g025380 Peroxidase 52 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc03g033690.2.1 Solyc03g033690 lignin peroxidase 0.04 OrthoFinder output from all 47 species Solyc03g033710.3.1 Solyc03g033710 lignin peroxidase 0.03 OrthoFinder output from all 47 species Solyc03g044100.4.1 Solyc03g044100 Peroxidase 51 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc04g076770.3.1 Solyc04g076770 lignin peroxidase 0.04 OrthoFinder output from all 47 species Solyc04g081860.3.1 Solyc04g081860 Peroxidase 64 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc05g010330.4.1 Solyc05g010330 Peroxidase 11 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc05g046000.4.1 Solyc05g046000 Peroxidase 27 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species Solyc05g046010.4.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc05g046020.3.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc05g052280.3.1 Solyc05g052280 Peroxidase 4 OS=Vitis vinifera (sp|a7ny33|per4_vitvi : 442.0) 0.03 OrthoFinder output from all 47 species Solyc06g050440.3.1 Solyc06g050440 Peroxidase 4 OS=Vitis vinifera (sp|a7ny33|per4_vitvi : 446.0) 0.05 OrthoFinder output from all 47 species Solyc06g076630.3.1 Solyc06g076630 Peroxidase 47 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species Solyc06g082420.4.1 Solyc06g082420 Cationic peroxidase 1 OS=Arachis hypogaea... 0.05 OrthoFinder output from all 47 species Solyc07g017880.4.1 Solyc07g017880 Peroxidase 16 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species Solyc07g047740.3.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc07g049240.3.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species Solyc07g052510.4.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.05 Len_g24068 details

Len_g24068 (AtDNMT2, DNMT2)


Aliases : AtDNMT2, DNMT2

Description : tRNA cytidine-methyltransferase *(DNMT) & original description: none


Gene families : OG0005935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24068

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00136580 AtDNMT2, DNMT2,... No description available 0.03 OrthoFinder output from all 47 species
Nbi_g43439 AtDNMT2, DNMT2 tRNA cytidine-methyltransferase *(DNMT) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MFOrthoFinder output from all 47 species GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 9 374
No external refs found!