Len_g21971 (HUA2)


Aliases : HUA2

Description : HUA2-type transcription factor & original description: none


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21971

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 HUA2,... RNA biosynthesis.transcriptional activation.HUA2... 0.05 OrthoFinder output from all 47 species
AT2G48160 No alias Tudor/PWWP/MBT domain-containing protein 0.03 OrthoFinder output from all 47 species
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.05 OrthoFinder output from all 47 species
AT5G08230 No alias Tudor/PWWP/MBT domain-containing protein 0.05 OrthoFinder output from all 47 species
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12546 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22454 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g42142 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42433.t1 Aspi01Gene42433 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42435.t2 HUA2, Aspi01Gene42435 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024616 HUA2 HUA2-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Azfi_s0048.g030472 HUA2 HUA2-type transcription factor & original description: CDS=1-4200 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.03 OrthoFinder output from all 47 species
Cba_g72521 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G048700.1 HUA2, Ceric.33G048700 HUA2-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.13 OrthoFinder output from all 47 species
Dac_g09393 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08999 No alias HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g14860 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g21799 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25712 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.08 OrthoFinder output from all 47 species
GSVIVT01012049001 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.06 OrthoFinder output from all 47 species
Gb_39860 HUA2 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
LOC_Os03g24339.1 LOC_Os03g24339 transcription factor (HUA2) 0.09 OrthoFinder output from all 47 species
LOC_Os07g46180.1 LOC_Os07g46180 transcription factor (HUA2) 0.07 OrthoFinder output from all 47 species
LOC_Os08g01054.2 HUA2, LOC_Os08g01054 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_3338g0010 No alias transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species
MA_6999g0010 No alias Protein HUA2-LIKE 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9328225g0010 HUA2 Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9359526g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Msp_g27240 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08516 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36625 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16391 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011426 HUA2 HUA2-type transcription factor & original description: CDS=5-4222 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013240 HUA2 HUA2-type transcription factor & original description: CDS=1-3765 0.03 OrthoFinder output from all 47 species
Sam_g04850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30186 No alias HUA2-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g51385 No alias HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo404055 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.04 OrthoFinder output from all 47 species
Solyc02g014115.1.1 HUA2, Solyc02g014115 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
Solyc02g014130.3.1 HUA2, Solyc02g014130 ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc09g064840.4.1 Solyc09g064840 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001720_P002 Zm00001e001720 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 24 108
IPR006569 CID_dom 915 1038
No external refs found!