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  5. Len_g21650

Len_g21650 (ALS3)


Aliases : ALS3

Description : not classified & original description: none


Gene families : OG0001009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21650

Target Alias Description ECC score Gene Family Method Actions
Aev_g31226 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05798 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08227 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03820 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59973 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22075 ALS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017676 No alias not classified & original description: CDS=250-1122 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005226 UPF0014_fam 109 340
No external refs found!