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Aliases : PDF2
Description : HD-ZIP IV-type transcription factor & original description: none
Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G05230 | HDG2 | homeodomain GLABROUS 2 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g14063 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18649 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g15179 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g27191 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g53005 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07013 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14579 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g70526 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14759 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027508001 | ANL2, AHDP | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g42490.1 | HDG5, HB-7,... | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| MA_122121g0010 | PDF2 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_305431g0010 | EDT1, HDG11, ATHDG11 | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| MA_93471g0010 | ANL2, AHDP | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14857 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19174 | EDT1, HDG11, ATHDG11 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17562 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001922 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091630.3.1 | ANL2, AHDP,... | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g098200.4.1 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g072310.3.1 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g005330.3.1 | PDF2, Solyc10g005330 | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09419 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16174 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g46298 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51145 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g52321 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14207 | ANL2, AHDP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006870_P004 | HDG2, Zm00001e006870 | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034755_P001 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008289 | lipid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |