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  5. Len_g19919

Len_g19919


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19919
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00166770 evm_27.TU.AmTr_v1... Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G29520 No alias AWPM-19-like family protein 0.04 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.03 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.04 OrthoFinder output from all 47 species
Adi_g077260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27953 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g35491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00976.t1 Aspi01Gene00976 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44336.t1 Aspi01Gene44336 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.03 OrthoFinder output from all 47 species
Ceric.27G060800.1 Ceric.27G060800 not classified & original description: pacid=50605763... 0.04 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.03 OrthoFinder output from all 47 species
Ceric.37G004800.1 Ceric.37G004800 not classified & original description: pacid=50615541... 0.11 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.12 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.09 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.11 OrthoFinder output from all 47 species
Dcu_g16603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g47552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017867001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01027944001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g50440.1 LOC_Os01g50440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10157399g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428014g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_400106g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g04500.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007798 No alias not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018226 No alias not classified & original description: CDS=107-538 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.03 OrthoFinder output from all 47 species
Sam_g00344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e028127_P001 Zm00001e028127 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 142
No external refs found!