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  5. Len_g19264

Len_g19264


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19264
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Aev_g06719 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18159 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28820 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10578 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18257 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59070 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48921.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26470 AT-GT2, GT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03068 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04858 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22999 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30439 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27401 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Gb_38519 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g19944 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10291373g0010 PTL no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_79519g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Msp_g06014 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35869 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25172 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10269 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42672 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g27535 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27740 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04670 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006964 No alias Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023173 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g48438 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Spa_g51431 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 679 766
IPR044822 Myb_DNA-bind_4 329 415
No external refs found!