Len_g19055 (APTX)

Aliases : APTX

Description : not classified & original description: none

Gene families : OG0003628 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003628_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g19055

Target	Alias	Description	ECC score	Gene Family Method
Aob_g11236	APTX	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g25020	APTX	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.09G029000.1	APTX, Ceric.09G029000	not classified & original description: pacid=50586540...	0.03	OrthoFinder output from all 47 species
MA_117044g0010	APTX	Transcription factor bHLH140 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Tin_g14874	APTX	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019406	APLF_PBZ	2	24
IPR032566	Znf-C2HE	735	790
IPR002589	Macro_dom	392	464

External Links

No external refs found!