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  5. Len_g13114

Len_g13114 (ATGCN5, GCN5)


Aliases : ATGCN5, GCN5

Description : not classified & original description: none


Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13114
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT5G64840 ATGCN5, GCN5 general control non-repressible 5 0.03 OrthoFinder output from all 47 species
Adi_g057121 ATGCN5, GCN5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04195 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16234 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g02291 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07329 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62480.t1 ATGCN5, GCN5,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0168.g054635 ATGCN5, GCN5 not classified & original description: CDS=239-2245 0.07 OrthoFinder output from all 47 species
Ceric.29G008900.1 ATGCN5, GCN5,... not classified & original description: pacid=50624672... 0.08 OrthoFinder output from all 47 species
Cre06.g265100 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre08.g372250 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g12683 ATGCN5, GCN5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g07651 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07834 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022235001 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01082 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Gb_01083 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os11g39020.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Lfl_g07903 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437027g0010 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g11090.1 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g14610 ATGCN5, GCN5 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g11528 ATGCN5, GCN5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30372 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09728 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g11340 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020515 ATGCN5, GCN5 not classified & original description: CDS=75-2189 0.03 OrthoFinder output from all 47 species
Sam_g19383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g051800.3.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g18685 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11682 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011297_P001 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 342 429
IPR003439 ABC_transporter-like_ATP-bd 457 587
IPR003439 ABC_transporter-like_ATP-bd 128 303
No external refs found!