Len_g11944 (HOT2, ELP, ATCTL1,...)

Aliases : HOT2, ELP, ATCTL1, POM1, CTL1, ELP1, ERH2

Description : regulatory protein *(CTL) of cellulose-hemicellulose network assembly & original description: none

Gene families : OG0004024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004024_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g11944

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013018	HOT2, ELP,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g12871	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Als_g10357	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Ceric.34G040100.1	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Dac_g24169	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
GSVIVT01035029001	CTL2, ATCTL2	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	OrthoFinder output from all 47 species
LOC_Os09g32080.2	HOT2, ELP,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Msp_g08778	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Nbi_g16520	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Spa_g25324	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Zm00001e034566_P001	HOT2, ELP,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016829	lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	50	278

External Links

No external refs found!

Len_g11944 (HOT2, ELP, ATCTL1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation