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  5. Len_g11806

Len_g11806 (PR 65, PP2AA2, PDF1)


Aliases : PR 65, PP2AA2, PDF1

Description : scaffold component A of PP2A phosphatase complexes & original description: none


Gene families : OG0004583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11806
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Als_g01009 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Aob_g02015 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Aop_g11847 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.28 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Dac_g07531 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.06 OrthoFinder output from all 47 species
Dcu_g08848 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Gb_34599 PR 65, PP2AA2, PDF1 scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.04 OrthoFinder output from all 47 species
LOC_Os09g07510.1 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species
Msp_g01170 RCN1, REGA,... scaffold component A of PP2A phosphatase complexes &... 0.06 OrthoFinder output from all 47 species
Nbi_g27630 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.06 OrthoFinder output from all 47 species
Pir_g19363 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Ppi_g32590 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Smo166330 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Smo232183 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Solyc06g069180.3.1 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species
Spa_g17298 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Tin_g10543 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.06 OrthoFinder output from all 47 species
Zm00001e036610_P002 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species
Zm00001e037405_P003 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 242 270
No external refs found!