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  5. Len_g09577

Len_g09577


Description : not classified & original description: none


Gene families : OG0004217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09577

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00105130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G38225 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g05899 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g12438 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06115 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g18936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09890.t1 Aspi01Gene09890 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0535.g076092 No alias not classified & original description: CDS=1-1002 0.04 OrthoFinder output from all 47 species
Cba_g23776 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.17G081100.1 Ceric.17G081100 not classified & original description: pacid=50617968... 0.04 OrthoFinder output from all 47 species
Dac_g11246 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15857 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03670.1 LOC_Os03g03670 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g01426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427407g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g12007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g45249 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g00888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_19510V3.1 Pp3c17_19510 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g23476 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g14431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo81134 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g08584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29084 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000224_P001 Zm00001e000224 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!