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  5. Len_g04756

Len_g04756


Description : subunit eta *(CCT7) of CCT chaperonin folding complex & original description: none


Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04756

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00107630 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
AT3G11830 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Adi_g113191 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Als_g10726 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Aob_g03439 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Ceric.05G016500.1 Ceric.05G016500 subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001371.8 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre01.g026550 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder output from all 47 species
Dac_g09536 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14177 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g02692 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g17138 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
MA_20110g0010 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp7g09680.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Ppi_g06900 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g18786 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g27520 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Smo168086 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Solyc06g065520.3.1 Solyc06g065520 CCT7 subunit eta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g06049 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Tin_g01076 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e025196_P001 Zm00001e025196 CCT7 subunit eta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 36 527
No external refs found!